• Teilhard de Chardin and cells.

    From Martin Harran@21:1/5 to All on Tue Nov 28 10:00:38 2023
    According to Louis Savary, writing about Teilhard de Chardin's ideas
    described in The Phenomenon of Man[1]:

    <quote>
    Early cells and the innumerable elements composing them are not
    constructed haphazardly. As operating systems, all cells are alike.
    The inner makeup, functions, and structures of all cells are similar
    as are the relationships among their elements. Teilhard finds this
    fact amazing. He explains why.

    All cells, from those in the simplest bacteria to those in a human
    brain, contain the same set of elements, the same types of proteins
    and acids. This is true, despite the fact that first cells emerging
    around the world could have been made up of other chemical formulas
    and structures. Because different cells were born in different
    climates and conditions, they had the opportunity to develop in a
    variety of ways. Yet, variation did not happen. The liquid bath in
    which a cell's parts move around has the same chemical makeup in all
    cells on Earth today.

    Because such a universal similarity in makeup does not appear
    logically necessary, it suggests nature made an early choice. The
    similarity of liquid bath in all cells worldwide "has been taken as
    proof that all existing organisms descended from a single ancestral
    group [of cells]" (95, 55).

    … All cells on our planet share an "inherent kinship" (100, 58)
    manifested in the absolute and universal uniformity of the basic
    cellular structure found in all living things on Earth.

    … Current research in DNA confirms Teilhard's statements in this
    section even though DNA hadn't been described or mapped when he was
    writing Phenomenon.

    </quote>

    Is Savary correct that almost 100 years on from when Teilhard came to
    those conclusions, they still stand?



    [1] Savary, L.M. (2020) Teilhard de Chardin's The Phenomenon of Man
    Explained [online], Paulist Press

    --- SoupGate-Win32 v1.05
    * Origin: fsxNet Usenet Gateway (21:1/5)
  • From Abner@21:1/5 to Martin Harran on Tue Nov 28 03:40:34 2023
    Martin Harran wrote:
    The inner makeup, functions, and structures of all cells are similar
    as are the relationships among their elements. Teilhard finds this
    fact amazing. He explains why.

    I'd find that amazing only if abiogenesis was a high probability event.
    IMO if abiogenesis is an event with low probability, the first living creature would tend to reproduce, branch out and eat the precursors of life.
    There could be relatively little in the way of raw precursors for new abiogenesis events to occur from, and any new abiogenesis events
    that did occur would generally result in unevolved organisms that would
    be at a major disadvantage compared to life that had a chance to
    improve itself a bit through evolution .... so established life would tend
    to eat any new life that showed up. Only if abiogenesis was a high
    probability event (or the new life forms were inedible to the old ones)
    would multiple types of creature occur from different abiogenesis events
    and have some chance of both getting established.

    Not saying it's impossible, but simultaneous abiogenesis events doesn't
    strike me as probable given what little we have learned about abiogenesis.

    --- SoupGate-Win32 v1.05
    * Origin: fsxNet Usenet Gateway (21:1/5)
  • From brogers31751@gmail.com@21:1/5 to Martin Harran on Tue Nov 28 03:14:17 2023
    On Tuesday, November 28, 2023 at 5:01:53 AM UTC-5, Martin Harran wrote:
    According to Louis Savary, writing about Teilhard de Chardin's ideas described in The Phenomenon of Man[1]:

    <quote>
    Early cells and the innumerable elements composing them are not
    constructed haphazardly. As operating systems, all cells are alike.
    The inner makeup, functions, and structures of all cells are similar
    as are the relationships among their elements. Teilhard finds this
    fact amazing. He explains why.

    All cells, from those in the simplest bacteria to those in a human
    brain, contain the same set of elements, the same types of proteins
    and acids. This is true, despite the fact that first cells emerging
    around the world could have been made up of other chemical formulas
    and structures. Because different cells were born in different
    climates and conditions, they had the opportunity to develop in a
    variety of ways. Yet, variation did not happen. The liquid bath in
    which a cell's parts move around has the same chemical makeup in all
    cells on Earth today.

    Because such a universal similarity in makeup does not appear
    logically necessary, it suggests nature made an early choice. The
    similarity of liquid bath in all cells worldwide "has been taken as
    proof that all existing organisms descended from a single ancestral
    group [of cells]" (95, 55).

    … All cells on our planet share an "inherent kinship" (100, 58)
    manifested in the absolute and universal uniformity of the basic
    cellular structure found in all living things on Earth.

    … Current research in DNA confirms Teilhard's statements in this
    section even though DNA hadn't been described or mapped when he was
    writing Phenomenon.

    </quote>

    Is Savary correct that almost 100 years on from when Teilhard came to
    those conclusions, they still stand?

    I'd say that "absolute and universal uniformity of the basic cellular structure" may be a bit of an overstatement, but that's a bit like arguing over whether some mountain is "really high" or "very high" or "unbelievably high." Basically I think what he
    said is correct.



    [1] Savary, L.M. (2020) Teilhard de Chardin's The Phenomenon of Man Explained [online], Paulist Press

    --- SoupGate-Win32 v1.05
    * Origin: fsxNet Usenet Gateway (21:1/5)
  • From Ernest Major@21:1/5 to Abner on Tue Nov 28 13:03:48 2023
    On 28/11/2023 11:40, Abner wrote:
    Martin Harran wrote:
    The inner makeup, functions, and structures of all cells are similar
    as are the relationships among their elements. Teilhard finds this
    fact amazing. He explains why.

    I'd find that amazing only if abiogenesis was a high probability event.
    IMO if abiogenesis is an event with low probability, the first living creature
    would tend to reproduce, branch out and eat the precursors of life.
    There could be relatively little in the way of raw precursors for new abiogenesis events to occur from, and any new abiogenesis events
    that did occur would generally result in unevolved organisms that would
    be at a major disadvantage compared to life that had a chance to
    improve itself a bit through evolution .... so established life would tend
    to eat any new life that showed up. Only if abiogenesis was a high probability event (or the new life forms were inedible to the old ones)
    would multiple types of creature occur from different abiogenesis events
    and have some chance of both getting established.

    Not saying it's impossible, but simultaneous abiogenesis events doesn't strike me as probable given what little we have learned about abiogenesis.


    A couple of other points

    1) Even if abiogenesis occurred more than once, it is not required that
    all instances have living representatives.

    2) Even if another instance of abiogenesis survived to the present, we
    wouldn't necessarily be aware of it. Some quite large and distinct
    prokaryotic lineages are only known from environmental DNA samples;
    single celled organisms with a different genetic material might be
    overlooked.

    Universal common descent of modern-day life on earth is a contingent and provisional fact.

    --
    alias Ernest Major

    --- SoupGate-Win32 v1.05
    * Origin: fsxNet Usenet Gateway (21:1/5)
  • From *Hemidactylus*@21:1/5 to Martin Harran on Tue Nov 28 17:16:22 2023
    Martin Harran <martinharran@gmail.com> wrote:
    According to Louis Savary, writing about Teilhard de Chardin's ideas described in The Phenomenon of Man[1]:

    <quote>
    Early cells and the innumerable elements composing them are not
    constructed haphazardly. As operating systems, all cells are alike.
    The inner makeup, functions, and structures of all cells are similar
    as are the relationships among their elements. Teilhard finds this
    fact amazing. He explains why.

    All cells, from those in the simplest bacteria to those in a human
    brain, contain the same set of elements, the same types of proteins
    and acids. This is true, despite the fact that first cells emerging
    around the world could have been made up of other chemical formulas
    and structures. Because different cells were born in different
    climates and conditions, they had the opportunity to develop in a
    variety of ways. Yet, variation did not happen. The liquid bath in
    which a cell's parts move around has the same chemical makeup in all
    cells on Earth today.

    Because such a universal similarity in makeup does not appear
    logically necessary, it suggests nature made an early choice. The
    similarity of liquid bath in all cells worldwide "has been taken as
    proof that all existing organisms descended from a single ancestral
    group [of cells]" (95, 55).

    Â… All cells on our planet share an "inherent kinship" (100, 58)
    manifested in the absolute and universal uniformity of the basic
    cellular structure found in all living things on Earth.

    Â… Current research in DNA confirms Teilhard's statements in this
    section even though DNA hadn't been described or mapped when he was
    writing Phenomenon.

    </quote>

    Is Savary correct that almost 100 years on from when Teilhard came to
    those conclusions, they still stand?



    [1] Savary, L.M. (2020) Teilhard de Chardin's The Phenomenon of Man
    Explained [online], Paulist Press


    For Teilhard it may not have been about origins so much as the happy ending
    of omega point toward Christ.

    --- SoupGate-Win32 v1.05
    * Origin: fsxNet Usenet Gateway (21:1/5)
  • From Ernest Major@21:1/5 to Lawyer Daggett on Thu Nov 30 14:01:23 2023
    On 30/11/2023 11:34, Lawyer Daggett wrote:
    On Tuesday, November 28, 2023 at 5:01:53 AM UTC-5, Martin Harran wrote:
    According to Louis Savary, writing about Teilhard de Chardin's ideas
    described in The Phenomenon of Man[1]:

    <quote>
    Early cells and the innumerable elements composing them are not
    constructed haphazardly. As operating systems, all cells are alike.
    The inner makeup, functions, and structures of all cells are similar
    as are the relationships among their elements. Teilhard finds this
    fact amazing. He explains why.

    All cells, from those in the simplest bacteria to those in a human
    brain, contain the same set of elements, the same types of proteins
    and acids. This is true, despite the fact that first cells emerging
    around the world could have been made up of other chemical formulas
    and structures. Because different cells were born in different
    climates and conditions, they had the opportunity to develop in a
    variety of ways. Yet, variation did not happen. The liquid bath in
    which a cell's parts move around has the same chemical makeup in all
    cells on Earth today.

    Because such a universal similarity in makeup does not appear
    logically necessary, it suggests nature made an early choice. The
    similarity of liquid bath in all cells worldwide "has been taken as
    proof that all existing organisms descended from a single ancestral
    group [of cells]" (95, 55).

    … All cells on our planet share an "inherent kinship" (100, 58)
    manifested in the absolute and universal uniformity of the basic
    cellular structure found in all living things on Earth.

    … Current research in DNA confirms Teilhard's statements in this
    section even though DNA hadn't been described or mapped when he was
    writing Phenomenon.

    </quote>

    Is Savary correct that almost 100 years on from when Teilhard came to
    those conclusions, they still stand?



    [1] Savary, L.M. (2020) Teilhard de Chardin's The Phenomenon of Man
    Explained [online], Paulist Press

    Frankly, when you read those words you quoted, they are empty balderdash.
    Try as one might, they don't fit to modern biochemistry. To be specific,

    This part:
    All cells, from those in the simplest bacteria to those in a human
    brain, contain the same set of elements, the same types of proteins
    and acids. This is true, despite the fact that first cells emerging
    around the world could have been made up of other chemical formulas
    and structures. Because different cells were born in different
    climates and conditions, they had the opportunity to develop in a
    variety of ways. Yet, variation did not happen. The liquid bath in
    which a cell's parts move around has the same chemical makeup in all
    cells on Earth today.

    How do you parse all of that? The best I can do is to see that he's saying that life is built up of the same amino acids. the same building blocks.
    That isn't significant in the way he would wish.

    It's perhaps unfair to be too critical of him given the lack of understanding of proteins and the significance of specific amino acid sequences, or the nature of DNA and its role to encode specific protein sequence structure.

    But ultimately it's gibberish in a modern context. It does not include useful specific information. It's vague generalities that ultimately say very little of
    significance. This should be clear ro you.

    So the question is, what is it about that quote that you find compelling?
    To me, as a biochemist, it's flowerily words that say nothing of significance.

    Taking it literally, life doesn't all have the same (homologous)
    proteins. There may be some that are universal, but most are
    phylogenetically restricted. (I suspect that the balance is somewhat
    different for protein domains.) Like you I presume that he was referring
    to use of the same amino acid residues in all organisms, which is
    approximately true (see pyrolysine, selenocysteine, hypusine,
    hydroxyproline, etc.), at least before humans started creating extended
    genetic codes.

    Reading him charitably he is appealing to biochemical universalities as evidence for universal common descent. Biochemical commonalities are a
    part of the evidence for universal common descent, with the proviso we
    don't have a good handle on the range of possible biochemistries.

    However I don't see what he is referring to when he refers to cell
    structure.

    --
    alias Ernest Major

    --- SoupGate-Win32 v1.05
    * Origin: fsxNet Usenet Gateway (21:1/5)
  • From =?UTF-8?B?w5bDtiBUaWli?=@21:1/5 to Lawyer Daggett on Thu Nov 30 05:12:41 2023
    On Thursday, 30 November 2023 at 13:36:54 UTC+2, Lawyer Daggett wrote:
    On Tuesday, November 28, 2023 at 5:01:53 AM UTC-5, Martin Harran wrote:
    According to Louis Savary, writing about Teilhard de Chardin's ideas described in The Phenomenon of Man[1]:

    <quote>
    Early cells and the innumerable elements composing them are not constructed haphazardly. As operating systems, all cells are alike.
    The inner makeup, functions, and structures of all cells are similar
    as are the relationships among their elements. Teilhard finds this
    fact amazing. He explains why.

    All cells, from those in the simplest bacteria to those in a human
    brain, contain the same set of elements, the same types of proteins
    and acids. This is true, despite the fact that first cells emerging
    around the world could have been made up of other chemical formulas
    and structures. Because different cells were born in different
    climates and conditions, they had the opportunity to develop in a
    variety of ways. Yet, variation did not happen. The liquid bath in
    which a cell's parts move around has the same chemical makeup in all
    cells on Earth today.

    Because such a universal similarity in makeup does not appear
    logically necessary, it suggests nature made an early choice. The similarity of liquid bath in all cells worldwide "has been taken as
    proof that all existing organisms descended from a single ancestral
    group [of cells]" (95, 55).

    … All cells on our planet share an "inherent kinship" (100, 58) manifested in the absolute and universal uniformity of the basic
    cellular structure found in all living things on Earth.

    … Current research in DNA confirms Teilhard's statements in this
    section even though DNA hadn't been described or mapped when he was writing Phenomenon.

    </quote>

    Is Savary correct that almost 100 years on from when Teilhard came to those conclusions, they still stand?



    [1] Savary, L.M. (2020) Teilhard de Chardin's The Phenomenon of Man Explained [online], Paulist Press
    Frankly, when you read those words you quoted, they are empty balderdash. Try as one might, they don't fit to modern biochemistry. To be specific,

    This part:
    All cells, from those in the simplest bacteria to those in a human
    brain, contain the same set of elements, the same types of proteins
    and acids. This is true, despite the fact that first cells emerging
    around the world could have been made up of other chemical formulas
    and structures. Because different cells were born in different
    climates and conditions, they had the opportunity to develop in a
    variety of ways. Yet, variation did not happen. The liquid bath in
    which a cell's parts move around has the same chemical makeup in all
    cells on Earth today.
    How do you parse all of that? The best I can do is to see that he's saying that life is built up of the same amino acids. the same building blocks. That isn't significant in the way he would wish.

    It's perhaps unfair to be too critical of him given the lack of understanding
    of proteins and the significance of specific amino acid sequences, or the nature of DNA and its role to encode specific protein sequence structure.

    But ultimately it's gibberish in a modern context. It does not include useful
    specific information. It's vague generalities that ultimately say very little of
    significance. This should be clear ro you.

    So the question is, what is it about that quote that you find compelling?
    To me, as a biochemist, it's flowerily words that say nothing of significance.

    As I see it there was indicated in gibberish maneer such facts:
    * there can be hundreds of different amino acids.
    * about 80 of those can be found formed abiotically in high enough concentrations (in meteorites and such)
    * life here uses 20 "standard" amino acids in proteins.
    * not all 20 are present among said 80
    * some of 20 are present but in way lower concentrations than some
    other "non-standard" amino acids.

    So the significant (for layman) things from that:
    1) Common decent was likely long after choice of amino acids?
    2) There can be innumerable alternative biochemistries?
    3) Biochemistry that we have might be is not the most obvious?
    4) Choice of (winner) biochemistry was based on something else
    but on availability of materials in abiotic nature?

    --- SoupGate-Win32 v1.05
    * Origin: fsxNet Usenet Gateway (21:1/5)
  • From Athel Cornish-Bowden@21:1/5 to Ernest Major on Thu Nov 30 17:57:10 2023
    On 2023-11-30 14:01:23 +0000, Ernest Major said:

    On 30/11/2023 11:34, Lawyer Daggett wrote:
    On Tuesday, November 28, 2023 at 5:01:53 AM UTC-5, Martin Harran wrote: >>> According to Louis Savary, writing about Teilhard de Chardin's ideas
    described in The Phenomenon of Man[1]:

    <quote>
    Early cells and the innumerable elements composing them are not
    constructed haphazardly. As operating systems, all cells are alike.
    The inner makeup, functions, and structures of all cells are similar
    as are the relationships among their elements. Teilhard finds this
    fact amazing. He explains why.

    All cells, from those in the simplest bacteria to those in a human
    brain, contain the same set of elements, the same types of proteins
    and acids. This is true, despite the fact that first cells emerging
    around the world could have been made up of other chemical formulas
    and structures. Because different cells were born in different
    climates and conditions, they had the opportunity to develop in a
    variety of ways. Yet, variation did not happen. The liquid bath in
    which a cell's parts move around has the same chemical makeup in all
    cells on Earth today.

    Because such a universal similarity in makeup does not appear
    logically necessary, it suggests nature made an early choice. The
    similarity of liquid bath in all cells worldwide "has been taken as
    proof that all existing organisms descended from a single ancestral
    group [of cells]" (95, 55).

    … All cells on our planet share an "inherent kinship" (100, 58)
    manifested in the absolute and universal uniformity of the basic
    cellular structure found in all living things on Earth.

    … Current research in DNA confirms Teilhard's statements in this
    section even though DNA hadn't been described or mapped when he was
    writing Phenomenon.

    </quote>

    Is Savary correct that almost 100 years on from when Teilhard came to
    those conclusions, they still stand?



    [1] Savary, L.M. (2020) Teilhard de Chardin's The Phenomenon of Man
    Explained [online], Paulist Press

    Frankly, when you read those words you quoted, they are empty balderdash.
    Try as one might, they don't fit to modern biochemistry. To be specific,

    This part:
    All cells, from those in the simplest bacteria to those in a human
    brain, contain the same set of elements, the same types of proteins
    and acids. This is true, despite the fact that first cells emerging
    around the world could have been made up of other chemical formulas
    and structures. Because different cells were born in different
    climates and conditions, they had the opportunity to develop in a
    variety of ways. Yet, variation did not happen. The liquid bath in
    which a cell's parts move around has the same chemical makeup in all
    cells on Earth today.

    How do you parse all of that? The best I can do is to see that he's saying >> that life is built up of the same amino acids. the same building blocks.
    That isn't significant in the way he would wish.

    The fact that he calls amino acids "acids" is a clear indication that
    he doesn't understand basic chemistry. That was certainly understood in
    1923. [Merriam-Webster
    (https://www.merriam-webster.com/dictionary/zwitterion) says that the
    term zwitterion dates from 1906, but I think the idea was understood
    before that.] Anyone who thinks glycine, for example, is an acid has
    obviously never tasted it. It has an acidic group (-NH_3^+, not -COO^-,
    as some textbook authors seem to think), but it lacks the normal characteristics of an acid. Given that -COO^- is not acidic implies, of
    course, that "amino acid" is a bad name, but it's too late to worry
    about that.

    It's perhaps unfair to be too critical of him given the lack of understanding
    of proteins and the significance of specific amino acid sequences,

    Specific sequences OK, but that doesn't forgive his ignorance of
    acid-base chemistry.

    or the
    nature of DNA and its role to encode specific protein sequence structure.

    But ultimately it's gibberish in a modern context. It does not include useful
    specific information. It's vague generalities that ultimately say very
    little of
    significance. This should be clear ro you.

    So the question is, what is it about that quote that you find compelling?
    To me, as a biochemist, it's flowerily words that say nothing of significance.

    Yes.

    Taking it literally, life doesn't all have the same (homologous)
    proteins. There may be some that are universal, but most are
    phylogenetically restricted. (I suspect that the balance is somewhat different for protein domains.) Like you I presume that he was
    referring to use of the same amino acid residues in all organisms,
    which is approximately true (see pyrolysine, selenocysteine, hypusine, hydroxyproline, etc.), at least before humans started creating extended genetic codes.

    Reading him charitably he is appealing to biochemical universalities as evidence for universal common descent. Biochemical commonalities are a
    part of the evidence for universal common descent, with the proviso we
    don't have a good handle on the range of possible biochemistries.

    However I don't see what he is referring to when he refers to cell structure.


    --
    Athel -- French and British, living in Marseilles for 36 years; mainly
    in England until 1987.

    --- SoupGate-Win32 v1.05
    * Origin: fsxNet Usenet Gateway (21:1/5)
  • From Athel Cornish-Bowden@21:1/5 to Ernest Major on Thu Nov 30 19:03:58 2023
    On 2023-11-30 17:36:09 +0000, Ernest Major said:

    On 30/11/2023 16:57, Athel Cornish-Bowden wrote:
    The fact that he calls amino acids "acids" is a clear indication that
    he doesn't understand basic chemistry. That was certainly understood in
    1923. [Merriam-Webster
    (https://www.merriam-webster.com/dictionary/zwitterion) says that the
    term zwitterion dates from 1906, but I think the idea was understood
    before that.] Anyone who thinks glycine, for example, is an acid has
    obviously never tasted it. It has an acidic group (-NH_3^+, not -COO^-,
    as some textbook authors seem to think), but it lacks the normal
    characteristics of an acid. Given that -COO^- is not acidic implies, of
    course, that "amino acid" is a bad name, but it's too late to worry
    about that.

    My interpretation was that by acid he meant DNA and RNA. While their
    function wasn't known when he was writing, it was known that they were
    a major chemical constituent of the cell.

    It was much later that it was understood that they were important for reproduction (Astbury, 1937; or, pehapd more, Florence Bell).

    But, as I thought of commenting to Martin, to understand Teilhard's
    intended meaning may require looking closer at the context.


    --
    Athel -- French and British, living in Marseilles for 36 years; mainly
    in England until 1987.

    --- SoupGate-Win32 v1.05
    * Origin: fsxNet Usenet Gateway (21:1/5)
  • From Mark Isaak@21:1/5 to All on Thu Nov 30 09:51:41 2023
    On 11/30/23 5:12 AM, Öö Tiib wrote:
    On Thursday, 30 November 2023 at 13:36:54 UTC+2, Lawyer Daggett wrote:
    On Tuesday, November 28, 2023 at 5:01:53 AM UTC-5, Martin Harran wrote: >>> According to Louis Savary, writing about Teilhard de Chardin's ideas
    described in The Phenomenon of Man[1]:

    <quote>
    Early cells and the innumerable elements composing them are not
    constructed haphazardly. As operating systems, all cells are alike.
    The inner makeup, functions, and structures of all cells are similar
    as are the relationships among their elements. Teilhard finds this
    fact amazing. He explains why.

    All cells, from those in the simplest bacteria to those in a human
    brain, contain the same set of elements, the same types of proteins
    and acids. This is true, despite the fact that first cells emerging
    around the world could have been made up of other chemical formulas
    and structures. Because different cells were born in different
    climates and conditions, they had the opportunity to develop in a
    variety of ways. Yet, variation did not happen. The liquid bath in
    which a cell's parts move around has the same chemical makeup in all
    cells on Earth today.

    Because such a universal similarity in makeup does not appear
    logically necessary, it suggests nature made an early choice. The
    similarity of liquid bath in all cells worldwide "has been taken as
    proof that all existing organisms descended from a single ancestral
    group [of cells]" (95, 55).

    … All cells on our planet share an "inherent kinship" (100, 58)
    manifested in the absolute and universal uniformity of the basic
    cellular structure found in all living things on Earth.

    … Current research in DNA confirms Teilhard's statements in this
    section even though DNA hadn't been described or mapped when he was
    writing Phenomenon.

    </quote>

    Is Savary correct that almost 100 years on from when Teilhard came to
    those conclusions, they still stand?



    [1] Savary, L.M. (2020) Teilhard de Chardin's The Phenomenon of Man
    Explained [online], Paulist Press
    Frankly, when you read those words you quoted, they are empty balderdash.
    Try as one might, they don't fit to modern biochemistry. To be specific,

    This part:
    All cells, from those in the simplest bacteria to those in a human
    brain, contain the same set of elements, the same types of proteins
    and acids. This is true, despite the fact that first cells emerging
    around the world could have been made up of other chemical formulas
    and structures. Because different cells were born in different
    climates and conditions, they had the opportunity to develop in a
    variety of ways. Yet, variation did not happen. The liquid bath in
    which a cell's parts move around has the same chemical makeup in all
    cells on Earth today.
    How do you parse all of that? The best I can do is to see that he's saying >> that life is built up of the same amino acids. the same building blocks.
    That isn't significant in the way he would wish.

    It's perhaps unfair to be too critical of him given the lack of understanding
    of proteins and the significance of specific amino acid sequences, or the
    nature of DNA and its role to encode specific protein sequence structure.

    But ultimately it's gibberish in a modern context. It does not include useful
    specific information. It's vague generalities that ultimately say very little of
    significance. This should be clear ro you.

    So the question is, what is it about that quote that you find compelling?
    To me, as a biochemist, it's flowerily words that say nothing of significance.

    As I see it there was indicated in gibberish maneer such facts:
    * there can be hundreds of different amino acids.
    * about 80 of those can be found formed abiotically in high enough concentrations (in meteorites and such)
    * life here uses 20 "standard" amino acids in proteins.
    * not all 20 are present among said 80
    * some of 20 are present but in way lower concentrations than some
    other "non-standard" amino acids.

    So the significant (for layman) things from that:
    1) Common decent was likely long after choice of amino acids?
    2) There can be innumerable alternative biochemistries?
    3) Biochemistry that we have might be is not the most obvious?
    4) Choice of (winner) biochemistry was based on something else
    but on availability of materials in abiotic nature?

    But de Chardin did not say any of that. His "same types of proteins" is
    vague enough that it could include all proteins made with 30 or 40 amino
    acids, or it could exclude most of the proteins we find in our bodies.

    Lawyer Daggett called it "flowery words that say nothing of
    significance." I think the significance is that the reader can read into
    those words almost anything they want to. In some contexts, that it a
    useful skill for a writer to have.

    --
    Mark Isaak
    "Wisdom begins when you discover the difference between 'That
    doesn't make sense' and 'I don't understand.'" - Mary Doria Russell

    --- SoupGate-Win32 v1.05
    * Origin: fsxNet Usenet Gateway (21:1/5)
  • From Ernest Major@21:1/5 to Athel Cornish-Bowden on Thu Nov 30 17:36:09 2023
    On 30/11/2023 16:57, Athel Cornish-Bowden wrote:
    The fact that he calls amino acids "acids" is a clear indication that he doesn't understand basic chemistry. That was certainly understood in
    1923. [Merriam-Webster (https://www.merriam-webster.com/dictionary/zwitterion) says that the
    term zwitterion dates from 1906, but I think the idea was understood
    before that.] Anyone who thinks glycine, for example, is an acid has obviously never tasted it. It has an acidic group (-NH_3^+, not -COO^-,
    as some textbook authors seem to think), but it lacks the normal characteristics of an acid. Given that -COO^- is not acidic implies, of course, that "amino acid" is a bad name, but it's too late to worry
    about that.

    My interpretation was that by acid he meant DNA and RNA. While their
    function wasn't known when he was writing, it was known that they were a
    major chemical constituent of the cell.

    But, as I thought of commenting to Martin, to understand Teilhard's
    intended meaning may require looking closer at the context.

    --
    alias Ernest Major

    --- SoupGate-Win32 v1.05
    * Origin: fsxNet Usenet Gateway (21:1/5)
  • From =?UTF-8?B?w5bDtiBUaWli?=@21:1/5 to Mark Isaak on Thu Nov 30 16:53:26 2023
    On Thursday, 30 November 2023 at 19:56:55 UTC+2, Mark Isaak wrote:
    On 11/30/23 5:12 AM, Öö Tiib wrote:

    As I see it there was indicated in gibberish maneer such facts:
    * there can be hundreds of different amino acids.
    * about 80 of those can be found formed abiotically in high enough concentrations (in meteorites and such)
    * life here uses 20 "standard" amino acids in proteins.
    * not all 20 are present among said 80
    * some of 20 are present but in way lower concentrations than some
    other "non-standard" amino acids.

    So the significant (for layman) things from that:
    1) Common decent was likely long after choice of amino acids?
    2) There can be innumerable alternative biochemistries?
    3) Biochemistry that we have might be is not the most obvious?
    4) Choice of (winner) biochemistry was based on something else
    but on availability of materials in abiotic nature?

    But de Chardin did not say any of that. His "same types of proteins" is vague enough that it could include all proteins made with 30 or 40 amino acids, or it could exclude most of the proteins we find in our bodies.

    I understood "same type of proteins" as polymers made of same set of amino-acids. He did die in fifties so had no ways to sequence peptides
    and proteins and find out levels of homology in those.

    Lawyer Daggett called it "flowery words that say nothing of
    significance." I think the significance is that the reader can read into those words almost anything they want to. In some contexts, that it a
    useful skill for a writer to have.

    I feel it bit silly to expect someone to talk in modern language about
    concepts that arose after their death in microbiology. How about the
    4 points I raised that are related to what he was likely capable to talk
    about? Are these significant or insignificant or totally not worth
    discussing?

    --- SoupGate-Win32 v1.05
    * Origin: fsxNet Usenet Gateway (21:1/5)