Source: thesias
Version: 3.1.1-1
Severity: serious
Justification: FTBFS
Tags: trixie sid ftbfs
User: lucas@debian.org
Usertags: ftbfs-20240313 ftbfs-trixie ftbfs-impfuncdef

Hi,

During a rebuild of all packages in sid, your package failed to build
on amd64.

This is most likely caused by a change in dpkg 1.22.6, that enabled -Werror=implicit-function-declaration. For more information, see https://wiki.debian.org/qa.debian.org/FTBFS#A2024-03-13_-Werror.3Dimplicit-function-declaration

Relevant part (hopefully):

cc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -I/usr/lib/jvm/default-java/

include -I/usr/lib/jvm/default-java/include/linux/ -c src/*.c

javac -d class java/*.java
Picked up JAVA_TOOL_OPTIONS: -Dfile.encoding=UTF8
src/newthesias3d.c: In function ‘thesiasRun’:
src/newthesias3d.c:6122:49: warning: too many arguments for format [-Wformat-extra-args]
6122 | fprintf(outres,"\t%f\t%f\n\n",effest[0],valse,effest[0]/valse);
| ^~~~~~~~~~~~~~ src/newthesias3d.c:6268:50: warning: too many arguments for format [-Wformat-extra-args]
6268 | fprintf(outres,"\t%f\t%f\n\n",effest[nc],valse,effest[nc]/valse);
| ^~~~~~~~~~~~~~ src/newthesias3d.c: In function ‘nbhapo0’:
src/newthesias3d.c:4084:4: warning: ignoring return value of ‘scanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
4084 | scanf("%c",&rep);
| ^~~~~~~~~~~~~~~~
src/newthesias3d.c: In function ‘lecteffe’:
src/newthesias3d.c:4299:17: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
4299 | fscanf(readParam,"%c",&rep);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~ src/newthesias3d.c:4312:25: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
4312 | fscanf(readParam,"%c",&rep);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~ src/newthesias3d.c:4318:25: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
4318 | fscanf(readParam,"%d",&hypoth);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/newthesias3d.c:4327:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
4327 | fscanf(readParam,"%d %d",&v1,&v2);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/newthesias3d.c:4336:25: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
4336 | fscanf(readParam,"%c",&rep);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~ src/newthesias3d.c:4345:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
4345 | fscanf(readParam,"%d",&nbhypor);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/newthesias3d.c:4357:41: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
4357 | fscanf(readParam,"%d",&v1);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~ src/newthesias3d.c:4369:41: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
4369 | fscanf(readParam,"%d %d",&v1,&v2);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
src/newthesias3d.c:4392:25: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
4392 | fscanf(readParam,"%c",&rep);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~ src/newthesias3d.c:4400:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
4400 | fscanf(readParam,"%d",&nbadd);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/newthesias3d.c:4408:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
4408 | fscanf(readParam,"%d %d",&v1,&v2);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/newthesias3d.c:4418:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
4418 | fscanf(readParam,"%c",&rep);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~ src/newthesias3d.c:4425:41: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
4425 | fscanf(readParam,"%d",&intercov);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
src/newthesias3d.c:4433:41: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
4433 | fscanf(readParam,"%d %d",&v1,&v2);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
src/newthesias3d.c:4474:9: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
4474 | fscanf(parfile,"%d\n",&nbhest);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
src/newthesias3d.c:4486:17: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
4486 | fscanf(parfile,"%d %lf %d %lf\n",&v2,&vv,&itp[i],&effest[i]);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
src/newthesias3d.c: In function ‘lecteffe5’:
src/newthesias3d.c:4652:17: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
4652 | fscanf(readParam,"%c",&rep);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~ src/newthesias3d.c:4666:25: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
4666 | fscanf(readParam,"%c",&rep);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~ src/newthesias3d.c:4672:25: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
4672 | fscanf(readParam,"%d",&hypoth);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/newthesias3d.c:4682:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
4682 | fscanf(readParam,"%d %d",&v1,&v2);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/newthesias3d.c:4696:25: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
4696 | fscanf(readParam,"%c",&rep);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~ src/newthesias3d.c:4704:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
4704 | fscanf(readParam,"%d",&nbhypor);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/newthesias3d.c:4715:41: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
4715 | fscanf(readParam,"%d",&v1);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~ src/newthesias3d.c:4727:41: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
4727 | fscanf(readParam,"%d %d",&v1,&v2);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
src/newthesias3d.c:4762:25: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
4762 | fscanf(readParam,"%c",&rep);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~ src/newthesias3d.c:4770:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
4770 | fscanf(readParam,"%d",&nbadd);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/newthesias3d.c:4778:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
4778 | fscanf(readParam,"%d %d",&v1,&v2);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/newthesias3d.c:4789:25: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
4789 | fscanf(readParam,"%c",&rep);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~ src/newthesias3d.c:4797:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
4797 | fscanf(readParam,"%d",&intercov);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/newthesias3d.c:4806:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
4806 | fscanf(readParam,"%d %d",&v1,&v2);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/newthesias3d.c:4821:3: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
4821 | fscanf(parfile,"%d\n",&nbhest);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
src/newthesias3d.c:4828:4: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
4828 | {fscanf(parfile,"%d %lf %d %lf\n",&v2,&vv,&idc,&valf);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ java/GraficT.java:1008: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
coaverCols2[k] = (new Integer(covarCols[k])).toString();
^ java/ParamTable.java:125: warning: [removal] Boolean(boolean) in Boolean has been deprecated and marked for removal
tableModel.data[k][2] = new Boolean(false);
^ java/ParamTable.java:126: warning: [removal] Boolean(boolean) in Boolean has been deprecated and marked for removal
tableModel.data[k][3] = new Boolean(false);
^ java/ParamTable.java:141: warning: [removal] Boolean(boolean) in Boolean has been deprecated and marked for removal
tableModel.data[i][2] = new Boolean(false);
^ java/ParamTable.java:143: warning: [removal] Boolean(boolean) in Boolean has been deprecated and marked for removal
tableModel.data[i][2] = new Boolean(true);
^ java/ParamTable.java:146: warning: [removal] Boolean(boolean) in Boolean has been deprecated and marked for removal
tableModel.data[i][3] = new Boolean(false);
^ java/ParamTable.java:148: warning: [removal] Boolean(boolean) in Boolean has been deprecated and marked for removal
tableModel.data[i][3] = new Boolean(true);
^ java/ParamTable.java:201: warning: [removal] Boolean(boolean) in Boolean has been deprecated and marked for removal
data[i][j] = new Boolean(false);
^
java/Homogeneity.java:246: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
return (new Integer(visiblePair)).toString();
^
java/OptionDialog.java:329: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
private Object[][] data= {{new Integer(2)}};
^
java/OptionDialog.java:119: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
dataTemp[i-1] = new Integer(i-1);
^ java/OptionDialog.java:123: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
dataTemp[i-1] = new Integer(i);
^
java/OptionDialog.java:143: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
dataBun[j] = (Object)(new Integer(((Integer)dataBun[j-1]).intValue()+ 1));
^ java/OptionDialog.java:372: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
{new Integer(1),"V5"},
^
java/OptionDialog.java:373: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
{new Integer(2),"V6"},
^
java/OptionDialog.java:374: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
{new Integer(3),""},
^
java/OptionDialog.java:375: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
{new Integer(4),""},
^
Note: Some input files use unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
17 warnings
jar cfe thesias.jar GraficT -C class . -C misc LogoThesias.png
Picked up JAVA_TOOL_OPTIONS: -Dfile.encoding=UTF8
src/newthesias3d.c: In function ‘fishnull’:
src/newthesias3d.c:795:19: warning: argument 1 value ‘18446744073709551608’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=]
795 | deriv=(double *) malloc((size_t) (dimf*sizeof(double)));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from src/newthesias3d.c:25:
/usr/include/stdlib.h:553:14: note: in a call to allocation function ‘malloc’ declared here
553 | extern void *malloc (size_t __size) __THROW __attribute_malloc__
| ^~~~~~
src/newthesias3d.c: In function ‘Xfishnull’:
src/newthesias3d.c:861:19: warning: argument 1 value ‘18446744073709551608’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=]
861 | deriv=(double *) malloc((size_t) (dimf*sizeof(double)));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/stdlib.h:553:14: note: in a call to allocation function ‘malloc’ declared here
553 | extern void *malloc (size_t __size) __THROW __attribute_malloc__
| ^~~~~~
src/thesiaslib.c: In function ‘Java_thesiaslib_thesiasRun’: src/thesiaslib.c:57:13: error: implicit declaration of function ‘thesiasRun’ [-Werror=implicit-function-declaration]
57 | i = thesiasRun(cFileName,
| ^~~~~~~~~~
cc1: some warnings being treated as errors
make[1]: *** [Makefile:34: libthesiaslib.so] Error 1

The full build log is available from: http://qa-logs.debian.net/2024/03/13/thesias_3.1.1-1_unstable.log

All bugs filed during this archive rebuild are listed at: https://bugs.debian.org/cgi-bin/pkgreport.cgi?tag=ftbfs-20240313;users=lucas@debian.org
or: https://udd.debian.org/bugs/?release=na&merged=ign&fnewerval=7&flastmodval=7&fusertag=only&fusertagtag=ftbfs-20240313&fusertaguser=lucas@debian.org&allbugs=1&cseverity=1&ctags=1&caffected=1#results

A list of current common problems and possible solutions is available at http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!

If you reassign this bug to another package, please mark it as 'affects'-ing this package. See https://www.debian.org/Bugs/server-control#affects

If you fail to reproduce this, please provide a build log and diff it with mine so that we can identify if something relevant changed in the meantime.

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