Source: xarray-datatree
Version: 0.0.14-1
Severity: serious
Justification: FTBFS
Tags: trixie sid ftbfs
User:
lucas@debian.org
Usertags: ftbfs-20240313 ftbfs-trixie
Hi,
During a rebuild of all packages in sid, your package failed to build
on amd64.
Relevant part (hopefully):
debian/rules binary
dh binary --buildsystem=pybuild
dh_update_autotools_config -O--buildsystem=pybuild
dh_autoreconf -O--buildsystem=pybuild
dh_auto_configure -O--buildsystem=pybuild
dh_auto_build -O--buildsystem=pybuild
I: pybuild plugin_pyproject:129: Building wheel for python3.12 with "build" module
I: pybuild base:305: python3.12 -m build --skip-dependency-check --no-isolation --wheel --outdir /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_datatree
* Building wheel...
running bdist_wheel
running build
running build_py
creating build
creating build/lib
creating build/lib/datatree
copying datatree/__init__.py -> build/lib/datatree
copying datatree/datatree.py -> build/lib/datatree
copying datatree/common.py -> build/lib/datatree
copying datatree/_version.py -> build/lib/datatree
copying datatree/testing.py -> build/lib/datatree
copying datatree/render.py -> build/lib/datatree
copying datatree/io.py -> build/lib/datatree
copying datatree/formatting_html.py -> build/lib/datatree
copying datatree/treenode.py -> build/lib/datatree
copying datatree/mapping.py -> build/lib/datatree
copying datatree/ops.py -> build/lib/datatree
copying datatree/iterators.py -> build/lib/datatree
copying datatree/formatting.py -> build/lib/datatree
copying datatree/extensions.py -> build/lib/datatree
creating build/lib/datatree/tests
copying datatree/tests/test_mapping.py -> build/lib/datatree/tests
copying datatree/tests/__init__.py -> build/lib/datatree/tests
copying datatree/tests/test_formatting.py -> build/lib/datatree/tests
copying datatree/tests/test_formatting_html.py -> build/lib/datatree/tests copying datatree/tests/test_io.py -> build/lib/datatree/tests
copying datatree/tests/test_datatree.py -> build/lib/datatree/tests
copying datatree/tests/test_extensions.py -> build/lib/datatree/tests
copying datatree/tests/test_dataset_api.py -> build/lib/datatree/tests copying datatree/tests/conftest.py -> build/lib/datatree/tests
copying datatree/tests/test_version.py -> build/lib/datatree/tests
copying datatree/tests/test_treenode.py -> build/lib/datatree/tests
running egg_info
creating xarray_datatree.egg-info
writing xarray_datatree.egg-info/PKG-INFO
writing dependency_links to xarray_datatree.egg-info/dependency_links.txt writing requirements to xarray_datatree.egg-info/requires.txt
writing top-level names to xarray_datatree.egg-info/top_level.txt
writing manifest file 'xarray_datatree.egg-info/SOURCES.txt'
reading manifest file 'xarray_datatree.egg-info/SOURCES.txt'
adding license file 'LICENSE'
writing manifest file 'xarray_datatree.egg-info/SOURCES.txt'
copying datatree/py.typed -> build/lib/datatree
installing to build/bdist.linux-x86_64/wheel
running install
running install_lib
creating build/bdist.linux-x86_64
creating build/bdist.linux-x86_64/wheel
creating build/bdist.linux-x86_64/wheel/datatree
copying build/lib/datatree/__init__.py -> build/bdist.linux-x86_64/wheel/datatree
creating build/bdist.linux-x86_64/wheel/datatree/tests
copying build/lib/datatree/tests/test_mapping.py -> build/bdist.linux-x86_64/wheel/datatree/tests
copying build/lib/datatree/tests/__init__.py -> build/bdist.linux-x86_64/wheel/datatree/tests
copying build/lib/datatree/tests/test_formatting.py -> build/bdist.linux-x86_64/wheel/datatree/tests
copying build/lib/datatree/tests/test_formatting_html.py -> build/bdist.linux-x86_64/wheel/datatree/tests
copying build/lib/datatree/tests/test_io.py -> build/bdist.linux-x86_64/wheel/datatree/tests
copying build/lib/datatree/tests/test_datatree.py -> build/bdist.linux-x86_64/wheel/datatree/tests
copying build/lib/datatree/tests/test_extensions.py -> build/bdist.linux-x86_64/wheel/datatree/tests
copying build/lib/datatree/tests/test_dataset_api.py -> build/bdist.linux-x86_64/wheel/datatree/tests
copying build/lib/datatree/tests/conftest.py -> build/bdist.linux-x86_64/wheel/datatree/tests
copying build/lib/datatree/tests/test_version.py -> build/bdist.linux-x86_64/wheel/datatree/tests
copying build/lib/datatree/tests/test_treenode.py -> build/bdist.linux-x86_64/wheel/datatree/tests
copying build/lib/datatree/datatree.py -> build/bdist.linux-x86_64/wheel/datatree
copying build/lib/datatree/common.py -> build/bdist.linux-x86_64/wheel/datatree
copying build/lib/datatree/_version.py -> build/bdist.linux-x86_64/wheel/datatree
copying build/lib/datatree/testing.py -> build/bdist.linux-x86_64/wheel/datatree
copying build/lib/datatree/render.py -> build/bdist.linux-x86_64/wheel/datatree
copying build/lib/datatree/io.py -> build/bdist.linux-x86_64/wheel/datatree copying build/lib/datatree/formatting_html.py -> build/bdist.linux-x86_64/wheel/datatree
copying build/lib/datatree/treenode.py -> build/bdist.linux-x86_64/wheel/datatree
copying build/lib/datatree/py.typed -> build/bdist.linux-x86_64/wheel/datatree
copying build/lib/datatree/mapping.py -> build/bdist.linux-x86_64/wheel/datatree
copying build/lib/datatree/ops.py -> build/bdist.linux-x86_64/wheel/datatree copying build/lib/datatree/iterators.py -> build/bdist.linux-x86_64/wheel/datatree
copying build/lib/datatree/formatting.py -> build/bdist.linux-x86_64/wheel/datatree
copying build/lib/datatree/extensions.py -> build/bdist.linux-x86_64/wheel/datatree
running install_egg_info
Copying xarray_datatree.egg-info to build/bdist.linux-x86_64/wheel/xarray_datatree-0.0.14.egg-info
running install_scripts
creating build/bdist.linux-x86_64/wheel/xarray_datatree-0.0.14.dist-info/WHEEL
creating '/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_datatree/.tmp-rqs6ezsl/xarray_datatree-0.0.14-py3-none-any.whl' and adding 'build/bdist.linux-x86_64/wheel' to it
adding 'datatree/__init__.py'
adding 'datatree/_version.py'
adding 'datatree/common.py'
adding 'datatree/datatree.py'
adding 'datatree/extensions.py'
adding 'datatree/formatting.py'
adding 'datatree/formatting_html.py'
adding 'datatree/io.py'
adding 'datatree/iterators.py'
adding 'datatree/mapping.py'
adding 'datatree/ops.py'
adding 'datatree/py.typed'
adding 'datatree/render.py'
adding 'datatree/testing.py'
adding 'datatree/treenode.py'
adding 'datatree/tests/__init__.py'
adding 'datatree/tests/conftest.py'
adding 'datatree/tests/test_dataset_api.py'
adding 'datatree/tests/test_datatree.py'
adding 'datatree/tests/test_extensions.py'
adding 'datatree/tests/test_formatting.py'
adding 'datatree/tests/test_formatting_html.py'
adding 'datatree/tests/test_io.py'
adding 'datatree/tests/test_mapping.py'
adding 'datatree/tests/test_treenode.py'
adding 'datatree/tests/test_version.py'
adding 'xarray_datatree-0.0.14.dist-info/LICENSE'
adding 'xarray_datatree-0.0.14.dist-info/METADATA'
adding 'xarray_datatree-0.0.14.dist-info/WHEEL'
adding 'xarray_datatree-0.0.14.dist-info/top_level.txt'
adding 'xarray_datatree-0.0.14.dist-info/RECORD'
removing build/bdist.linux-x86_64/wheel
Successfully built xarray_datatree-0.0.14-py3-none-any.whl
I: pybuild plugin_pyproject:144: Unpacking wheel built for python3.12 with "installer" module
I: pybuild plugin_pyproject:129: Building wheel for python3.11 with "build" module
I: pybuild base:305: python3.11 -m build --skip-dependency-check --no-isolation --wheel --outdir /<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_datatree
* Building wheel...
running bdist_wheel
running build
running build_py
copying datatree/_version.py -> build/lib/datatree
creating build/lib/build
creating build/lib/build/lib
creating build/lib/build/lib/datatree
copying build/lib/datatree/__init__.py -> build/lib/build/lib/datatree copying build/lib/datatree/datatree.py -> build/lib/build/lib/datatree copying build/lib/datatree/common.py -> build/lib/build/lib/datatree
copying build/lib/datatree/_version.py -> build/lib/build/lib/datatree copying build/lib/datatree/testing.py -> build/lib/build/lib/datatree
copying build/lib/datatree/render.py -> build/lib/build/lib/datatree
copying build/lib/datatree/io.py -> build/lib/build/lib/datatree
copying build/lib/datatree/formatting_html.py -> build/lib/build/lib/datatree copying build/lib/datatree/treenode.py -> build/lib/build/lib/datatree copying build/lib/datatree/mapping.py -> build/lib/build/lib/datatree
copying build/lib/datatree/ops.py -> build/lib/build/lib/datatree
copying build/lib/datatree/iterators.py -> build/lib/build/lib/datatree copying build/lib/datatree/formatting.py -> build/lib/build/lib/datatree copying build/lib/datatree/extensions.py -> build/lib/build/lib/datatree creating build/lib/build/lib/datatree/tests
copying build/lib/datatree/tests/test_mapping.py -> build/lib/build/lib/datatree/tests
copying build/lib/datatree/tests/__init__.py -> build/lib/build/lib/datatree/tests
copying build/lib/datatree/tests/test_formatting.py -> build/lib/build/lib/datatree/tests
copying build/lib/datatree/tests/test_formatting_html.py -> build/lib/build/lib/datatree/tests
copying build/lib/datatree/tests/test_io.py -> build/lib/build/lib/datatree/tests
copying build/lib/datatree/tests/test_datatree.py -> build/lib/build/lib/datatree/tests
copying build/lib/datatree/tests/test_extensions.py -> build/lib/build/lib/datatree/tests
copying build/lib/datatree/tests/test_dataset_api.py -> build/lib/build/lib/datatree/tests
copying build/lib/datatree/tests/conftest.py -> build/lib/build/lib/datatree/tests
copying build/lib/datatree/tests/test_version.py -> build/lib/build/lib/datatree/tests
copying build/lib/datatree/tests/test_treenode.py -> build/lib/build/lib/datatree/tests
running egg_info
writing xarray_datatree.egg-info/PKG-INFO
writing dependency_links to xarray_datatree.egg-info/dependency_links.txt writing requirements to xarray_datatree.egg-info/requires.txt
writing top-level names to xarray_datatree.egg-info/top_level.txt
reading manifest file 'xarray_datatree.egg-info/SOURCES.txt'
adding license file 'LICENSE'
writing manifest file 'xarray_datatree.egg-info/SOURCES.txt'
installing to build/bdist.linux-x86_64/wheel
running install
running install_lib
creating build/bdist.linux-x86_64/wheel
creating build/bdist.linux-x86_64/wheel/datatree
copying build/lib/datatree/__init__.py -> build/bdist.linux-x86_64/wheel/datatree
creating build/bdist.linux-x86_64/wheel/datatree/tests
copying build/lib/datatree/tests/test_mapping.py -> build/bdist.linux-x86_64/wheel/datatree/tests
copying build/lib/datatree/tests/__init__.py -> build/bdist.linux-x86_64/wheel/datatree/tests
copying build/lib/datatree/tests/test_formatting.py -> build/bdist.linux-x86_64/wheel/datatree/tests
copying build/lib/datatree/tests/test_formatting_html.py -> build/bdist.linux-x86_64/wheel/datatree/tests
copying build/lib/datatree/tests/test_io.py -> build/bdist.linux-x86_64/wheel/datatree/tests
copying build/lib/datatree/tests/test_datatree.py -> build/bdist.linux-x86_64/wheel/datatree/tests
copying build/lib/datatree/tests/test_extensions.py -> build/bdist.linux-x86_64/wheel/datatree/tests
copying build/lib/datatree/tests/test_dataset_api.py -> build/bdist.linux-x86_64/wheel/datatree/tests
copying build/lib/datatree/tests/conftest.py -> build/bdist.linux-x86_64/wheel/datatree/tests
copying build/lib/datatree/tests/test_version.py -> build/bdist.linux-x86_64/wheel/datatree/tests
copying build/lib/datatree/tests/test_treenode.py -> build/bdist.linux-x86_64/wheel/datatree/tests
copying build/lib/datatree/datatree.py -> build/bdist.linux-x86_64/wheel/datatree
copying build/lib/datatree/common.py -> build/bdist.linux-x86_64/wheel/datatree
copying build/lib/datatree/_version.py -> build/bdist.linux-x86_64/wheel/datatree
copying build/lib/datatree/testing.py -> build/bdist.linux-x86_64/wheel/datatree
copying build/lib/datatree/render.py -> build/bdist.linux-x86_64/wheel/datatree
copying build/lib/datatree/io.py -> build/bdist.linux-x86_64/wheel/datatree copying build/lib/datatree/formatting_html.py -> build/bdist.linux-x86_64/wheel/datatree
copying build/lib/datatree/treenode.py -> build/bdist.linux-x86_64/wheel/datatree
copying build/lib/datatree/py.typed -> build/bdist.linux-x86_64/wheel/datatree
copying build/lib/datatree/mapping.py -> build/bdist.linux-x86_64/wheel/datatree
copying build/lib/datatree/ops.py -> build/bdist.linux-x86_64/wheel/datatree copying build/lib/datatree/iterators.py -> build/bdist.linux-x86_64/wheel/datatree
copying build/lib/datatree/formatting.py -> build/bdist.linux-x86_64/wheel/datatree
copying build/lib/datatree/extensions.py -> build/bdist.linux-x86_64/wheel/datatree
creating build/bdist.linux-x86_64/wheel/build
creating build/bdist.linux-x86_64/wheel/build/lib
creating build/bdist.linux-x86_64/wheel/build/lib/datatree
copying build/lib/build/lib/datatree/__init__.py -> build/bdist.linux-x86_64/wheel/build/lib/datatree
creating build/bdist.linux-x86_64/wheel/build/lib/datatree/tests
copying build/lib/build/lib/datatree/tests/test_mapping.py -> build/bdist.linux-x86_64/wheel/build/lib/datatree/tests
copying build/lib/build/lib/datatree/tests/__init__.py -> build/bdist.linux-x86_64/wheel/build/lib/datatree/tests
copying build/lib/build/lib/datatree/tests/test_formatting.py -> build/bdist.linux-x86_64/wheel/build/lib/datatree/tests
copying build/lib/build/lib/datatree/tests/test_formatting_html.py -> build/bdist.linux-x86_64/wheel/build/lib/datatree/tests
copying build/lib/build/lib/datatree/tests/test_io.py -> build/bdist.linux-x86_64/wheel/build/lib/datatree/tests
copying build/lib/build/lib/datatree/tests/test_datatree.py -> build/bdist.linux-x86_64/wheel/build/lib/datatree/tests
copying build/lib/build/lib/datatree/tests/test_extensions.py -> build/bdist.linux-x86_64/wheel/build/lib/datatree/tests
copying build/lib/build/lib/datatree/tests/test_dataset_api.py -> build/bdist.linux-x86_64/wheel/build/lib/datatree/tests
copying build/lib/build/lib/datatree/tests/conftest.py -> build/bdist.linux-x86_64/wheel/build/lib/datatree/tests
copying build/lib/build/lib/datatree/tests/test_version.py -> build/bdist.linux-x86_64/wheel/build/lib/datatree/tests
copying build/lib/build/lib/datatree/tests/test_treenode.py -> build/bdist.linux-x86_64/wheel/build/lib/datatree/tests
copying build/lib/build/lib/datatree/datatree.py -> build/bdist.linux-x86_64/wheel/build/lib/datatree
copying build/lib/build/lib/datatree/common.py -> build/bdist.linux-x86_64/wheel/build/lib/datatree
copying build/lib/build/lib/datatree/_version.py -> build/bdist.linux-x86_64/wheel/build/lib/datatree
copying build/lib/build/lib/datatree/testing.py -> build/bdist.linux-x86_64/wheel/build/lib/datatree
copying build/lib/build/lib/datatree/render.py -> build/bdist.linux-x86_64/wheel/build/lib/datatree
copying build/lib/build/lib/datatree/io.py -> build/bdist.linux-x86_64/wheel/build/lib/datatree
copying build/lib/build/lib/datatree/formatting_html.py -> build/bdist.linux-x86_64/wheel/build/lib/datatree
copying build/lib/build/lib/datatree/treenode.py -> build/bdist.linux-x86_64/wheel/build/lib/datatree
copying build/lib/build/lib/datatree/mapping.py -> build/bdist.linux-x86_64/wheel/build/lib/datatree
copying build/lib/build/lib/datatree/ops.py -> build/bdist.linux-x86_64/wheel/build/lib/datatree
copying build/lib/build/lib/datatree/iterators.py -> build/bdist.linux-x86_64/wheel/build/lib/datatree
copying build/lib/build/lib/datatree/formatting.py -> build/bdist.linux-x86_64/wheel/build/lib/datatree
copying build/lib/build/lib/datatree/extensions.py -> build/bdist.linux-x86_64/wheel/build/lib/datatree
running install_egg_info
Copying xarray_datatree.egg-info to build/bdist.linux-x86_64/wheel/xarray_datatree-0.0.14.egg-info
running install_scripts
creating build/bdist.linux-x86_64/wheel/xarray_datatree-0.0.14.dist-info/WHEEL
creating '/<<PKGBUILDDIR>>/.pybuild/cpython3_3.11_datatree/.tmp-ubzfgbht/xarray_datatree-0.0.14-py3-none-any.whl' and adding 'build/bdist.linux-x86_64/wheel' to it
adding 'build/lib/datatree/__init__.py'
adding 'build/lib/datatree/_version.py'
adding 'build/lib/datatree/common.py'
adding 'build/lib/datatree/datatree.py'
adding 'build/lib/datatree/extensions.py'
adding 'build/lib/datatree/formatting.py'
adding 'build/lib/datatree/formatting_html.py'
adding 'build/lib/datatree/io.py'
adding 'build/lib/datatree/iterators.py'
adding 'build/lib/datatree/mapping.py'
adding 'build/lib/datatree/ops.py'
adding 'build/lib/datatree/render.py'
adding 'build/lib/datatree/testing.py'
adding 'build/lib/datatree/treenode.py'
adding 'build/lib/datatree/tests/__init__.py'
adding 'build/lib/datatree/tests/conftest.py'
adding 'build/lib/datatree/tests/test_dataset_api.py'
adding 'build/lib/datatree/tests/test_datatree.py'
adding 'build/lib/datatree/tests/test_extensions.py'
adding 'build/lib/datatree/tests/test_formatting.py'
adding 'build/lib/datatree/tests/test_formatting_html.py'
adding 'build/lib/datatree/tests/test_io.py'
adding 'build/lib/datatree/tests/test_mapping.py'
adding 'build/lib/datatree/tests/test_treenode.py'
adding 'build/lib/datatree/tests/test_version.py'
adding 'datatree/__init__.py'
adding 'datatree/_version.py'
adding 'datatree/common.py'
adding 'datatree/datatree.py'
adding 'datatree/extensions.py'
adding 'datatree/formatting.py'
adding 'datatree/formatting_html.py'
adding 'datatree/io.py'
adding 'datatree/iterators.py'
adding 'datatree/mapping.py'
adding 'datatree/ops.py'
adding 'datatree/py.typed'
adding 'datatree/render.py'
adding 'datatree/testing.py'
adding 'datatree/treenode.py'
adding 'datatree/tests/__init__.py'
adding 'datatree/tests/conftest.py'
adding 'datatree/tests/test_dataset_api.py'
adding 'datatree/tests/test_datatree.py'
adding 'datatree/tests/test_extensions.py'
adding 'datatree/tests/test_formatting.py'
adding 'datatree/tests/test_formatting_html.py'
adding 'datatree/tests/test_io.py'
adding 'datatree/tests/test_mapping.py'
adding 'datatree/tests/test_treenode.py'
adding 'datatree/tests/test_version.py'
adding 'xarray_datatree-0.0.14.dist-info/LICENSE'
adding 'xarray_datatree-0.0.14.dist-info/METADATA'
adding 'xarray_datatree-0.0.14.dist-info/WHEEL'
adding 'xarray_datatree-0.0.14.dist-info/top_level.txt'
adding 'xarray_datatree-0.0.14.dist-info/RECORD'
removing build/bdist.linux-x86_64/wheel
Successfully built xarray_datatree-0.0.14-py3-none-any.whl
I: pybuild plugin_pyproject:144: Unpacking wheel built for python3.11 with "installer" module
dh_auto_test -O--buildsystem=pybuild
I: pybuild base:305: cd /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_datatree/build; python3.12 -m pytest --pyargs datatree
============================= test session starts ==============================
platform linux -- Python 3.12.2, pytest-8.0.2, pluggy-1.4.0
rootdir: /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_datatree/build
collected 165 items
datatree/tests/test_dataset_api.py ........ [ 4%]
datatree/tests/test_datatree.py .......................xx.......x......x [ 29%]
xx.............x............... [ 47%]
datatree/tests/test_extensions.py . [ 48%]
datatree/tests/test_formatting.py ........F [ 53%]
datatree/tests/test_formatting_html.py ....... [ 58%]
datatree/tests/test_io.py ........ [ 63%]
datatree/tests/test_mapping.py ...................x..x....x..x [ 81%]
datatree/tests/test_treenode.py ............................. [ 99%]
datatree/tests/test_version.py . [100%]
=================================== FAILURES ===================================
____________________ TestDiffFormatting.test_diff_node_data ____________________
self = <datatree.tests.test_formatting.TestDiffFormatting object at 0x7f737fd1ca70>
def test_diff_node_data(self):
import numpy as np
# casting to int64 explicitly ensures that int64s are created on all architectures
ds1 = Dataset({"u": np.int64(0), "v": np.int64(1)})
ds3 = Dataset({"w": np.int64(5)})
dt_1 = DataTree.from_dict({"a": ds1, "a/b": ds3})
ds2 = Dataset({"u": np.int64(0)})
ds4 = Dataset({"w": np.int64(6)})
dt_2 = DataTree.from_dict({"a": ds2, "a/b": ds4})
expected = dedent(
"""\
Left and right DataTree objects are not equal
Data in nodes at position '/a' do not match:
Data variables only on the left object:
v int64 1
Data in nodes at position '/a/b' do not match:
Differing data variables:
L w int64 5
R w int64 6"""
)
actual = diff_tree_repr(dt_1, dt_2, "equals")
assert actual == expected
E AssertionError: assert 'Left and rig... int64 8B 6' == 'Left and rig... int64 6'
E
E Skipping 143 identical leading characters in diff, use -v to show
E - int64 1
E + int64 8B 1
E ? +++
E
E Data in nodes at position '/a/b' do not match:...
E
E ...Full output truncated (8 lines hidden), use '-vv' to show
datatree/tests/test_formatting.py:120: AssertionError =============================== warnings summary ===============================
../../../../../../usr/lib/python3/dist-packages/dateutil/tz/tz.py:37
/usr/lib/python3/dist-packages/dateutil/tz/tz.py:37: DeprecationWarning: datetime.datetime.utcfromtimestamp() is deprecated and scheduled for removal in a future version. Use timezone-aware objects to represent datetimes in UTC: datetime.datetime.
fromtimestamp(timestamp, datetime.UTC).
EPOCH = datetime.datetime.utcfromtimestamp(0)
../../../../../../usr/lib/python3/dist-packages/xarray/tests/__init__.py:170
/usr/lib/python3/dist-packages/xarray/tests/__init__.py:170: PytestUnknownMarkWarning: Unknown pytest.mark.flaky - is this a typo? You can register custom marks to avoid this warning - for details, see https://docs.pytest.org/en/stable/how-to/mark.
html
flaky = pytest.mark.flaky
../../../../../../usr/lib/python3/dist-packages/xarray/tests/__init__.py:171
/usr/lib/python3/dist-packages/xarray/tests/__init__.py:171: PytestUnknownMarkWarning: Unknown pytest.mark.network - is this a typo? You can register custom marks to avoid this warning - for details, see https://docs.pytest.org/en/stable/how-to/mark.
html
network = pytest.mark.network
datatree/tests/test_io.py::TestIO::test_to_netcdf
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_datatree/build/datatree/io.py:74: RuntimeWarning: deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-user42/pytest-12/test_to_netcdf0/test.nc', mode='r', kwargs={'clobber': True,
'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='eeb05666-93c5-4680-8001-3a7ba0bfc6ad'), but file is not already closed. This may indicate a bug.
new_node: DataTree = DataTree(name=node_name, data=subgroup_ds)
datatree/tests/test_io.py::TestIO::test_to_netcdf
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_datatree/build/datatree/io.py:74: RuntimeWarning: deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-user42/pytest-12/test_to_netcdf0/test.nc', mode='r', kwargs={'clobber': True,
'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='aa9ef8d5-dc55-40cb-ae4c-04d03c95ecf7'), but file is not already closed. This may indicate a bug.
new_node: DataTree = DataTree(name=node_name, data=subgroup_ds)
datatree/tests/test_io.py::TestIO::test_to_netcdf
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_datatree/build/datatree/io.py:74: RuntimeWarning: deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-user42/pytest-12/test_to_netcdf0/test.nc', mode='r', kwargs={'clobber': True,
'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='2878e401-17f8-4d04-9ded-5229e3f07885'), but file is not already closed. This may indicate a bug.
new_node: DataTree = DataTree(name=node_name, data=subgroup_ds)
datatree/tests/test_io.py::TestIO::test_to_netcdf
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_datatree/build/datatree/io.py:58: RuntimeWarning: deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-user42/pytest-12/test_to_netcdf0/test.nc', mode='r', kwargs={'clobber': True,
'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='83a72803-b95b-4448-bf73-69dfa2ed92c7'), but file is not already closed. This may indicate a bug.
return _open_datatree_netcdf(filename_or_obj, engine=engine, **kwargs)
datatree/tests/test_io.py::TestIO::test_to_netcdf
/usr/lib/python3/dist-packages/xarray/core/indexing.py:690: RuntimeWarning: deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-user42/pytest-12/test_to_netcdf0/test.nc', mode='r', kwargs={'clobber': True, 'diskless':
False, 'persist': False, 'format': 'NETCDF4'}, manager_id='7fd85b49-1fd8-4688-afa7-d9da3fca9eb1'), but file is not already closed. This may indicate a bug.
self.array = as_indexable(self.array.get_duck_array())
datatree/tests/test_io.py::TestIO::test_to_netcdf
/usr/lib/python3/dist-packages/xarray/core/indexing.py:690: RuntimeWarning: deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-user42/pytest-12/test_to_netcdf0/test.nc', mode='r', kwargs={'clobber': True, 'diskless':
False, 'persist': False, 'format': 'NETCDF4'}, manager_id='280c5d52-2ea3-4ce7-a880-05bf3295ac42'), but file is not already closed. This may indicate a bug.
self.array = as_indexable(self.array.get_duck_array())
datatree/tests/test_io.py::TestIO::test_netcdf_encoding
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_datatree/build/datatree/io.py:74: RuntimeWarning: deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-user42/pytest-12/test_netcdf_encoding0/test.nc', mode='r', kwargs={'clobber':
True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='bf06cd1c-e1bd-47ec-b663-be4c0884189d'), but file is not already closed. This may indicate a bug.
new_node: DataTree = DataTree(name=node_name, data=subgroup_ds)
datatree/tests/test_io.py::TestIO::test_netcdf_encoding
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_datatree/build/datatree/io.py:74: RuntimeWarning: deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-user42/pytest-12/test_netcdf_encoding0/test.nc', mode='r', kwargs={'clobber':
True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='041a1e8a-2c7b-40bb-bcb3-2b3a1f768abc'), but file is not already closed. This may indicate a bug.
new_node: DataTree = DataTree(name=node_name, data=subgroup_ds)
datatree/tests/test_io.py::TestIO::test_netcdf_encoding
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_datatree/build/datatree/io.py:74: RuntimeWarning: deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-user42/pytest-12/test_netcdf_encoding0/test.nc', mode='r', kwargs={'clobber':
True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='8fcddbc6-0ddf-4bf0-99d8-0bce25306caf'), but file is not already closed. This may indicate a bug.
new_node: DataTree = DataTree(name=node_name, data=subgroup_ds)
datatree/tests/test_io.py::TestIO::test_netcdf_encoding
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_datatree/build/datatree/io.py:58: RuntimeWarning: deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-user42/pytest-12/test_netcdf_encoding0/test.nc', mode='r', kwargs={'clobber':
True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='47be72c3-8abb-41fc-b185-8a32852e1b9e'), but file is not already closed. This may indicate a bug.
return _open_datatree_netcdf(filename_or_obj, engine=engine, **kwargs)
datatree/tests/test_io.py::TestIO::test_to_h5netcdf
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_datatree/build/datatree/io.py:74: RuntimeWarning: deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-user42/pytest-12/test_to_h5netcdf0/test.nc', mode='r', kwargs={'clobber':
True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='943012f4-e1da-47a3-82f7-4ab0b1cb86b5'), but file is not already closed. This may indicate a bug.
new_node: DataTree = DataTree(name=node_name, data=subgroup_ds)
datatree/tests/test_io.py::TestIO::test_to_h5netcdf
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_datatree/build/datatree/io.py:74: RuntimeWarning: deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-user42/pytest-12/test_to_h5netcdf0/test.nc', mode='r', kwargs={'clobber':
True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='bce29f3f-2212-469a-9a4c-d018ace670b2'), but file is not already closed. This may indicate a bug.
new_node: DataTree = DataTree(name=node_name, data=subgroup_ds)
datatree/tests/test_io.py::TestIO::test_to_h5netcdf
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_datatree/build/datatree/io.py:74: RuntimeWarning: deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-user42/pytest-12/test_to_h5netcdf0/test.nc', mode='r', kwargs={'clobber':
True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='ef7dbd13-5dc8-47ba-939a-e92c75422eb3'), but file is not already closed. This may indicate a bug.
new_node: DataTree = DataTree(name=node_name, data=subgroup_ds)
datatree/tests/test_io.py::TestIO::test_to_h5netcdf
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_datatree/build/datatree/io.py:58: RuntimeWarning: deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-user42/pytest-12/test_to_h5netcdf0/test.nc', mode='r', kwargs={'clobber':
True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='eae7e33d-762e-4bfd-9d00-c19f5cb7d589'), but file is not already closed. This may indicate a bug.
return _open_datatree_netcdf(filename_or_obj, engine=engine, **kwargs)
datatree/tests/test_io.py::TestIO::test_to_h5netcdf
/usr/lib/python3/dist-packages/xarray/core/indexing.py:690: RuntimeWarning: deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-user42/pytest-12/test_to_h5netcdf0/test.nc', mode='r', kwargs={'clobber': True, 'diskless':
False, 'persist': False, 'format': 'NETCDF4'}, manager_id='15fd3ff6-125b-4430-a0ee-0c01df635ac5'), but file is not already closed. This may indicate a bug.
self.array = as_indexable(self.array.get_duck_array())
datatree/tests/test_io.py::TestIO::test_to_h5netcdf
/usr/lib/python3/dist-packages/xarray/core/indexing.py:690: RuntimeWarning: deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-user42/pytest-12/test_to_h5netcdf0/test.nc', mode='r', kwargs={'clobber': True, 'diskless':
False, 'persist': False, 'format': 'NETCDF4'}, manager_id='91176f41-8245-4b79-b1d8-fb2560fd84e7'), but file is not already closed. This may indicate a bug.
self.array = as_indexable(self.array.get_duck_array())
datatree/tests/test_io.py::TestIO::test_to_zarr_zip_store
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