• Bug#1066633: poa: FTBFS: fasta_format.c:48:9: error: implicit declarati

    From Lucas Nussbaum@21:1/5 to All on Wed Mar 13 14:20:03 2024
    Source: poa
    Version: 2.0+20060928-8
    Severity: serious
    Justification: FTBFS
    Tags: trixie sid ftbfs
    User: lucas@debian.org
    Usertags: ftbfs-20240313 ftbfs-trixie ftbfs-impfuncdef

    Hi,

    During a rebuild of all packages in sid, your package failed to build
    on amd64.

    This is most likely caused by a change in dpkg 1.22.6, that enabled -Werror=implicit-function-declaration. For more information, see https://wiki.debian.org/qa.debian.org/FTBFS#A2024-03-13_-Werror.3Dimplicit-function-declaration

    Relevant part (hopefully):
    gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -DUSE_WEIGHTED_LINKS -DUSE_PROJECT_HEADER -I. -Wdate-time -D_
    FORTIFY_SOURCE=2 -c -o align_lpo_po2.o align_lpo_po2.c
    In file included from align_lpo_po2.c:2:
    align_lpo_po2.c: In function ‘get_lpo_stats’:
    default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘long unsigned int’ [-Wformat=]
    155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); \
    | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~
    | |
    | long unsigned int align_lpo_po2.c:41:3: note: in expansion of macro ‘CALLOC’
    41 | CALLOC (node_type, len, int);
    | ^~~~~~
    default.h:155:37: note: format string is defined here
    155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); \
    | ~^
    | |
    | int
    | %ld
    default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘long unsigned int’ [-Wformat=]
    155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); \
    | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~
    | |
    | long unsigned int align_lpo_po2.c:42:3: note: in expansion of macro ‘CALLOC’
    42 | CALLOC (refs_from_right, len, int);
    | ^~~~~~
    default.h:155:37: note: format string is defined here
    155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); \
    | ~^
    | |
    | int
    | %ld
    default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘long unsigned int’ [-Wformat=]
    155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); \
    | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~
    | |
    | long unsigned int align_lpo_po2.c:43:3: note: in expansion of macro ‘CALLOC’
    43 | CALLOC (tmp, len, int);
    | ^~~~~~
    default.h:155:37: note: format string is defined here
    155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); \
    | ~^
    | |
    | int
    | %ld
    default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘long unsigned int’ [-Wformat=]
    155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); \
    | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~
    | |
    | long unsigned int align_lpo_po2.c:44:3: note: in expansion of macro ‘CALLOC’
    44 | CALLOC (left_links, len, LPOLetterLink_T *);
    | ^~~~~~
    default.h:155:37: note: format string is defined here
    155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); \
    | ~^
    | |
    | int
    | %ld
    default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘long unsigned int’ [-Wformat=]
    155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); \
    | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~
    | |
    | long unsigned int align_lpo_po2.c:71:7: note: in expansion of macro ‘CALLOC’
    71 | CALLOC (left_links[i], 1, LPOLetterLink_T);
    | ^~~~~~
    default.h:155:37: note: format string is defined here
    155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); \
    | ~^
    | |
    | int
    | %ld
    fasta_format.c: In function ‘read_fasta’:
    align_lpo_po2.c: In function ‘trace_back_lpo_alignment’: default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘long unsigned int’ [-Wformat=]
    155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); \
    | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~
    | |
    | long unsigned int align_lpo_po2.c:120:3: note: in expansion of macro ‘CALLOC’
    120 | CALLOC (x_al, len_x, LPOLetterRef_T);
    | ^~~~~~
    default.h:155:37: note: format string is defined here
    155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); \
    | ~^
    | |
    | int
    | %ld
    default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘long unsigned int’ [-Wformat=]
    155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); \
    | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~
    | |
    | long unsigned int align_lpo_po2.c:121:3: note: in expansion of macro ‘CALLOC’
    121 | CALLOC (y_al, len_y, LPOLetterRef_T);
    | ^~~~~~
    default.h:155:37: note: format string is defined here
    155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); \
    | ~^
    | |
    | int
    | %ld
    fasta_format.c:48:9: error: implicit declaration of function ‘stringptr_cat_pos’; did you mean ‘stringptr_cat’? [-Werror=implicit-function-declaration]
    48 | stringptr_cat_pos(&tmp_seq,line,&length);
    | ^~~~~~~~~~~~~~~~~
    | stringptr_cat
    align_lpo_po2.c: In function ‘align_lpo_po’:
    default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘long unsigned int’ [-Wformat=]
    155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); \
    | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~
    | |
    | long unsigned int align_lpo_po2.c:227:3: note: in expansion of macro ‘CALLOC’
    227 | CALLOC (next_gap_array, max_gap_length + 2, int);
    | ^~~~~~
    default.h:155:37: note: format string is defined here
    155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); \
    | ~^
    | |
    | int
    | %ld
    default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘long unsigned int’ [-Wformat=]
    155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); \
    | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~
    | |
    | long unsigned int align_lpo_po2.c:228:3: note: in expansion of macro ‘CALLOC’
    228 | CALLOC (next_perp_gap_array, max_gap_length + 2, int);
    | ^~~~~~
    default.h:155:37: note: format string is defined here
    155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); \
    | ~^
    | |
    | int
    | %ld
    default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘long unsigned int’ [-Wformat=]
    155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); \
    | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~
    | |
    | long unsigned int align_lpo_po2.c:254:3: note: in expansion of macro ‘CALLOC’
    254 | CALLOC (move, len_y, DPMove_T *);
    | ^~~~~~
    default.h:155:37: note: format string is defined here
    155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); \
    | ~^
    | |
    | int
    | %ld
    default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘long unsigned int’ [-Wformat=]
    155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); \
    | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~
    | |
    | long unsigned int align_lpo_po2.c:256:5: note: in expansion of macro ‘CALLOC’
    256 | CALLOC (move[i], len_x, DPMove_T);
    | ^~~~~~
    default.h:155:37: note: format string is defined here
    155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); \
    | ~^
    | |
    | int
    | %ld
    default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘long unsigned int’ [-Wformat=]
    155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); \
    | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~
    | |
    | long unsigned int align_lpo_po2.c:259:3: note: in expansion of macro ‘CALLOC’
    259 | CALLOC (init_col_score, len_y+1, DPScore_T);
    | ^~~~~~
    default.h:155:37: note: format string is defined here
    155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); \
    | ~^
    | |
    | int
    | %ld
    default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘long unsigned int’ [-Wformat=]
    155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); \
    | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~
    | |
    | long unsigned int align_lpo_po2.c:262:3: note: in expansion of macro ‘CALLOC’
    262 | CALLOC (score_rows, len_y+1, DPScore_T *);
    | ^~~~~~
    default.h:155:37: note: format string is defined here
    155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); \
    | ~^
    | |
    | int
    | %ld
    default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘long unsigned int’ [-Wformat=]
    155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); \
    | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~
    | |
    | long unsigned int align_lpo_po2.c:264:3: note: in expansion of macro ‘CALLOC’
    264 | CALLOC (score_rows[-1], len_x+1, DPScore_T);
    | ^~~~~~
    default.h:155:37: note: format string is defined here
    155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); \
    | ~^
    | |
    | int
    | %ld
    default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘long unsigned int’ [-Wformat=]
    155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); \
    | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~
    | |
    | long unsigned int align_lpo_po2.c:312:5: note: in expansion of macro ‘CALLOC’
    312 | CALLOC (score_rows[i], len_x+1, DPScore_T);
    | ^~~~~~
    default.h:155:37: note: format string is defined here
    155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); \
    | ~^
    | |
    | int
    | %ld
    align_lpo_po2.c:438:44: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 4 has type ‘int’ [-Wformat=]
    438 | fprintf (stderr, "aligned (%d nodes, %ld edges) to (%d nodes, %ld edges): ", len_x, n_edges_x, len_y, n_edges_y);
    | ~~^ ~~~~~~~~~
    | | |
    | long int int
    | %d
    align_lpo_po2.c:438:69: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 6 has type ‘int’ [-Wformat=]
    438 | fprintf (stderr, "aligned (%d nodes, %ld edges) to (%d nodes, %ld edges): ", len_x, n_edges_x, len_y, n_edges_y);
    | ~~^ ~~~~~~~~~
    | | |
    | long int int
    | %d In file included from black_flag.c:4:
    black_flag.c: In function ‘black_flag_init_args’:
    default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘long unsigned int’ [-Wformat=]
    155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); \
    | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~
    | |
    | long unsigned int black_flag.c:109:3: note: in expansion of macro ‘CALLOC’
    109 | CALLOC(Program_name,len,char);
    | ^~~~~~
    default.h:155:37: note: format string is defined here
    155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); \
    | ~^
    | |
    | int
    | %ld
    In file included from align_lpo2.c:2:
    align_lpo2.c: In function ‘get_seq_left_and_final’:
    default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘long unsigned int’ [-Wformat=]
    155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); \
    | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~
    | |
    | long unsigned int align_lpo2.c:60:3: note: in expansion of macro ‘CALLOC’
    60 | CALLOC (is_final_node_x, len_x, int);
    | ^~~~~~
    default.h:155:37: note: format string is defined here
    155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); \
    | ~^
    | |
    | int
    | %ld
    default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘long unsigned int’ [-Wformat=]
    155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); \
    | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~
    | |
    | long unsigned int align_lpo2.c:66:3: note: in expansion of macro ‘CALLOC’
    66 | CALLOC (x_left, len_x, LPOLetterLink_T *);
    | ^~~~~~
    default.h:155:37: note: format string is defined here
    155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); \
    | ~^
    | |
    | int
    | %ld
    In file included from lpo.h:6,
    from main.c:3:
    main.c: In function ‘main’:
    default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘long unsigned int’ [-Wformat=]
    155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); \
    | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~
    | |
    | long unsigned int align_lpo2.c:70:7: note: in expansion of macro ‘CALLOC’
    70 | CALLOC (x_left[i], 1, LPOLetterLink_T);
    | ^~~~~~
    default.h:155:37: note: format string is defined here
    155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); \
    | ~^
    | |
    | int
    | %ld
    ./default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘long unsigned int’ [-Wformat=]
    155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); \
    | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~
    | |
    | long unsigned int main.c:183:3: note: in expansion of macro ‘CALLOC’
    183 | CALLOC (input_seqs, max_input_seqs, LPOSequence_T *);
    | ^~~~~~
    ./default.h:155:37: note: format string is defined here
    155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); \
    | ~^
    | |
    | int
    | %ld
    align_lpo2.c: In function ‘trace_back_lpo_alignment’:
    default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘long unsigned int’ [-Wformat=]
    155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); \
    | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~
    | |
    | long unsigned int align_lpo2.c:96:3: note: in expansion of macro ‘CALLOC’
    96 | CALLOC (x_al, len_x, LPOLetterRef_T);
    | ^~~~~~
    default.h:155:37: note: format string is defined here
    155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); \
    | ~^
    | |
    | int
    | %ld
    ./default.h:196:22: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘long unsigned int’ [-Wformat=]
    196 | fprintf(stderr,"requested %d x %d bytes \n",(NUM),sizeof(ATYPE)); \
    | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~
    | |
    | long unsigned int
    main.c:221:9: note: in expansion of macro ‘REALLOC’
    221 | REALLOC (input_seqs, max_input_seqs, LPOSequence_T *);
    | ^~~~~~~
    default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘long unsigned int’ [-Wformat=]
    155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); \
    | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~
    | |
    | long unsigned int align_lpo2.c:97:3: note: in expansion of macro ‘CALLOC’
    97 | CALLOC (y_al, len_y, LPOLetterRef_T);
    | ^~~~~~
    default.h:155:37: note: format string is defined here
    155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); \
    | ~^
    | |
    | int
    | %ld
    ./default.h:196:39: note: format string is defined here
    196 | fprintf(stderr,"requested %d x %d bytes \n",(NUM),sizeof(ATYPE)); \
    | ~^
    | |
    | int
    | %ld
    In file included from ./default.h:16:
    main.c:225:30: warning: format ‘%s’ expects argument of type ‘char *’, but argument 3 has type ‘FILE *’ [-Wformat=]
    225 | WARN_MSG(USERR,(ERRTXT,"Error reading PO list file %s.\nExiting",
    | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
    226 | po_list_file),"$Revision: 1.2.2.9 $");
    | ~~~~~~~~~~~~
    | |
    | FILE *
    ./black_flag.h:212:10: note: in definition of macro ‘WARN_MSG’
    212 | (sprintf MESSAGE,\
    | ^~~~~~~
    main.c:225:59: note: format string is defined here
    225 | WARN_MSG(USERR,(ERRTXT,"Error reading PO list file %s.\nExiting",
    | ~^
    | |
    | char * align_lpo2.c: In function ‘align_lpo’:
    default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘long unsigned int’ [-Wformat=]
    155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); \
    | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~
    | |
    | long unsigned int align_lpo2.c:185:3: note: in expansion of macro ‘CALLOC’
    185 | CALLOC (next_gap_array, max_gap_length + 2, int);
    | ^~~~~~
    default.h:155:37: note: format string is defined here
    155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); \
    | ~^
    | |
    | int
    | %ld
    ./default.h:196:22: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘long unsigned int’ [-Wformat=]
    196 | fprintf(stderr,"requested %d x %d bytes \n",(NUM),sizeof(ATYPE)); \
    | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~
    | |
    | long unsigned int
    main.c:254:9: note: in expansion of macro ‘REALLOC’
    254 | REALLOC (input_seqs, max_input_seqs, LPOSequence_T *);
    | ^~~~~~~
    ./default.h:196:39: note: format string is defined here
    196 | fprintf(stderr,"requested %d x %d bytes \n",(NUM),sizeof(ATYPE)); \
    | ~^
    | |
    | int
    | %ld
    default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘long unsigned int’ [-Wformat=]
    155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); \
    | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~
    | |
    | long unsigned int align_lpo2.c:186:3: note: in expansion of macro ‘CALLOC’
    186 | CALLOC (next_perp_gap_array, max_gap_length + 2, int);
    | ^~~~~~
    default.h:155:37: note: format string is defined here
    155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); \
    | ~^
    | |
    | int
    | %ld
    default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘long unsigned int’ [-Wformat=]
    155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); \
    | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~
    | |
    | long unsigned int align_lpo2.c:199:3: note: in expansion of macro ‘CALLOC’
    199 | CALLOC (move, len_y, DPMove_T *);
    | ^~~~~~
    default.h:155:37: note: format string is defined here
    155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); \
    | ~^
    | |
    | int
    | %ld
    default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘long unsigned int’ [-Wformat=]
    155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); \
    | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~
    | |
    | long unsigned int align_lpo2.c:201:5: note: in expansion of macro ‘CALLOC’
    201 | CALLOC (move[i], len_x, DPMove_T);
    | ^~~~~~
    default.h:155:37: note: format string is defined here
    155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); \
    | ~^
    | |
    | int
    | %ld
    default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘long unsigned int’ [-Wformat=]
    155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); \
    | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~
    | |
    | long unsigned int align_lpo2.c:204:3: note: in expansion of macro ‘CALLOC’
    204 | CALLOC (init_col_score, len_y+1, DPScore_T);
    | ^~~~~~
    default.h:155:37: note: format string is defined here
    155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); \
    | ~^
    | |
    | int
    | %ld
    default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘long unsigned int’ [-Wformat=]
    155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); \
    | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~
    | |
    | long unsigned int align_lpo2.c:207:3: note: in expansion of macro ‘CALLOC’
    207 | CALLOC (curr_score, len_x+1, DPScore_T);
    | ^~~~~~
    default.h:155:37: note: format string is defined here
    155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); \
    | ~^
    | |
    | int
    | %ld
    default.h:155:20: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘long unsigned int’ [-Wformat=]
    155 | fprintf(stderr,"requested %d x %d bytes \n",(N),sizeof(ATYPE)); \
    | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~
    | |

    [continued in next message]

    --- SoupGate-Win32 v1.05
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  • From Debian Bug Tracking System@21:1/5 to All on Wed Mar 13 22:20:01 2024
    Processing control commands:

    tag -1 pending
    Bug #1066633 [src:poa] poa: FTBFS: fasta_format.c:48:9: error: implicit declaration of function ‘stringptr_cat_pos’; did you mean ‘stringptr_cat’? [-Werror=implicit-function-declaration]
    Added tag(s) pending.

    --
    1066633: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1066633
    Debian Bug Tracking System
    Contact owner@bugs.debian.org with problems

    --- SoupGate-Win32 v1.05
    * Origin: fsxNet Usenet Gateway (21:1/5)
  • From =?UTF-8?Q?=C3=89tienne?= Mollier@21:1/5 to All on Wed Mar 13 22:20:01 2024
    Control: tag -1 pending

    Hello,

    Bug #1066633 in poa reported by you has been fixed in the
    Git repository and is awaiting an upload. You can see the commit
    message below and you can check the diff of the fix at:

    https://salsa.debian.org/med-team/poa/-/commit/321a813c57dcfaf6c8937bf5d4976da90af08c69

    ------------------------------------------------------------------------ fix-declaration.patch: new: fix missing declarations.

    Closes: #1066633 ------------------------------------------------------------------------

    (this message was generated automatically)
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    Greetings

    https://bugs.debian.org/1066633

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    and subject line Bug#1066633: fixed in poa 2.0+20060928-9
    has caused the Debian Bug report #1066633,
    regarding poa: FTBFS: fasta_format.c:48:9: error: implicit declaration of function ‘stringptr_cat_pos’; did you mean ‘stringptr_cat’? [-Werror=implicit-function-declaration]
    to be marked as done.

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