Source: libsbml
Version: 5.20.2+dfsg-1
Severity: serious
User: debian-python@lists.debian.org
Usertags: python3.12

Hi Maintainer

libsbml's autopkgtests fail with Python 3.12 [1]. I've copied what I
hope is the relevant part of the log below.

Regards
Graham


[1] https://ci.debian.net/packages/libs/libsbml/testing/amd64/


28s autopkgtest [08:07:17]: test autodep8-python3: [-----------------------
28s Testing with python3.12:
28s Traceback (most recent call last):
28s File "<string>", line 1, in <module>
28s File "/usr/lib/python3/dist-packages/libsbml/libsbml.py", line 27,
in <module>
28s import _libsbml
28s ModuleNotFoundError: No module named '_libsbml'
29s autopkgtest [08:07:18]: test autodep8-python3: -----------------------]

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Hi Andreas

On Fri, 29 Dec 2023 at 22:34, Andreas Tille <andreas@an3as.eu> wrote:

If I remember correctly python3-sbml works only with one Python3 version
at the same time. Thus we probably need to rebuild once Python3.12 is default. Patches to fix this are welcome but upstream does not want to
do any effort to fix this situation.

Then do not try to run the autopkgtest for all supported versions.

I believe this is due to:

Testsuite: autopkgtest-pkg-python

in debian/control.

Regards
Graham

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Control: tag -1 pending

Hello,

Bug #1059650 in libsbml reported by you has been fixed in the
Git repository and is awaiting an upload. You can see the commit
message below and you can check the diff of the fix at:

https://salsa.debian.org/med-team/libsbml/-/commit/c04371a65f0823ab8ad298c0d741f0e308faac8c

------------------------------------------------------------------------ d/control: X-Python3-Version: 3.11 (==)

While this change is not ideal, because of the upcoming necessary
upload to bring python3.12 support when it becomes the default, it is
a short term fix to move the python3.12 migration forward.

Closes: #1059650 ------------------------------------------------------------------------

(this message was generated automatically)
--
Greetings

https://bugs.debian.org/1059650

--- SoupGate-Win32 v1.05
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Processing control commands:

tag -1 pending

Bug #1059650 [src:libsbml] libsbml: autopkgtest failure with Python 3.12
Added tag(s) pending.

--
1059650: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1059650
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems

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and subject line Bug#1059650: fixed in libsbml 5.20.2+dfsg-2
has caused the Debian Bug report #1059650,
regarding libsbml: autopkgtest failure with Python 3.12
to be marked as done.

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--
1059650: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1059650
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems

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